English Українська
  • Головна
  • Корисні посилання
  • Про журнал
  • Авторам
  • Редакційна колегія

  • Стаття
    В. М. Помогайбо, А. В. Петрушов

    ГЕНЕТИЧНІ КОМУНІКАЦІЇ В СИСТЕМІ «ПАРАЗИТ – ЖИВИТЕЛЬ»


    Про автора: В. М. Помогайбо, А. В. Петрушов
    Рубрика ОГЛЯДИ ЛІТЕРАТУРИ
    Тип статті Оглядова стаття
    Анотація Генетичні комунікації (горизонтальне, або латеральне перенесення генів) між різними, навіть чужорідними організмами є загальнобіологічним явищем і джерелом швидкої та масової мінливості організмів без мутацій та рекомбінацій. Вони здійснюються за допомогою векторів (вірусів, плазмід та мобільних генетичних елементів), за умови тісного фізичного контакту (копуляції, кон’югації, симбіозу, паразитизму, трансплантації), а також за допомогою паразитів-кур’єрів. В системі «паразит – живитель» генетичні комунікації відбуваються в обох напрямках. Подальше їх вивчення дозволить краще зрозуміти процеси геномної коеволюції та паразитарної епідеміології.
    Ключові слова генетичні комунікації, горизонтальне перенесення генів, паразит, живитель, вектори, фізичний контакт, коеволюція, паразитарна епідеміологія
    Список цитованої літератури
    • Aravind L. Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles / L. È. Aravind, R. L. Tatusov, Y. I. Wolf [et al.] // Trends Genet. – 1998. – Vol. 14. – No. 11. – P. 442-444.
    • Andersson J. O. A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution / J. O. Andersson, A. M. Sjogren, D. S. Horner [et al.] // BMC Genomics. – 2007. – No. 8:51. – 25 p.
    • Anderson M. T. Opportunity and means: horizontal gene transfer from the human host to a bacterial pathogen / M. T. Anderson, H. S. Seifert // MBio. – 2011. – Vol. 2. – Iss. 1. – 5 p.
    • Boucher Y. Lateral gene transfer and the origin of prokaryotic groups / Y. Boucher, Ch. J. Douady, R. Th. Papke [et al.] // Ann. Rev. Genet. – 2003. – Vol. 37. – P. 283-328.
    • Boschetti C. Biochemical diversification through foreign gene expression in bdelloid rotifers / Ch. Boschetti, A. Carr, A. Crisp [et al.] // PLoS Genet. – 2012. – Vol. 8. – Iss. 11 – 12 p.
    • Canchaya C. Phage as agents of lateral gene transfer / C. Canchaya, Gh. Fournous, S. Chibani-Chennoufi [et al.] // Curr. Opin. Microbiol, – 2003. – Vol. 6. – No. 4. – P. 417-424.
    • Chénais B. Vectors for gene therapy: A place for DNA transposon / B. Chénais // Open J. Genet.. – 2013. – Vol. 3. – No. 2A. – 11 p.
    • Dhar A. Alu elements in a Plasmodium vivax antigen gene / A. Dhar, S. Gupta, Y. D. Sharma // FEBS Letters. – 1998. – Vol. 423. – No. 2. – P. 193-197.
    • Davison J. Genetic exchange between bacteria in the environment / J. Davison // Plasmid. – 1999. – Vol. 42. – Iss. 2. – P. 73-91.
    • De Koning A.P. Lateral gene transfer and metabolic adaptation in the human parasite Trichomonas vaginalis / A.P. de Koning, F.S.L. Brinkman, S.J.M. Jones [et al.] // Mol. Biol. Evol. – 2000. – Vol. 17. – No. 11. – P. 1769-1773.
    • De Boer J. G. Bursts and horizontal evolution of DNA transposons in the speciation of pseudotetraploid salmonids / J.G de Boer, R. Yazawa, W.S. Davidson [et al.] // BMC Genomics. – 2007. – No. 8:422. – 10 p.
    • Danchin E. G. J. Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes / E. G. J. Danchin, M.-N. Rosso, P. Vieira [et al.] // Proc. Nat. Acad. Sci. USA. – 2010. – Vol. 107. – No. 41. – P. 17651-17656.
    • Diao Y. Next-generation sequencing reveals recent horizontal transfer of a DNA transposon between divergent mosquitoes / Y. Diao, Y. Qi, Y. Ma [et al.] // PLoS ONE. – 2011. – Vol. 6. – Iss. 2. – 8 p.
    • Di Matteo M. Recent developments in transposon-mediated gene therapy / M. Di Matteo, E. Belay, M. K. Chuah [et al.] // Exp. Opin. Biol. Therapy. – 2012. – Vol. 12. – No. 7 . – P. 841-858.
    • DeWoody J. A. Of contigs and quagmires: next-gen sequencing pitfalls associated with transcriptomic studies / J. A. DeWoody, K. C. Abts, A.L. Fahey [et al.] // Mol. Ecol. Res. – 2013. – Vol. 13. – No. 4. – P. 551-558.
    • Finan T. M. Evolving insights: Symbiosis islands and horizontal gene transfer / T. M. Finan // J. Bacteriol. – 2002. – Vol. 184. – No. 11. – P. 2855-2856.
    • Groisman E. A. Horizontal transfer of a phosphatase gene as evidence or the mosaic structure of the Salmonella genome / E. A.Groisman, M. H. Saier,Jr. H. Ochman // EMBO J. – 1992. – Vol. 11. – No. 4. – P. 1309-1316.
    • Gerolami R. Gene transfer to hepatocellular carcinoma: Transduction efficacy and transgene expression kinetics by using retroviral and lentiviral vectors / R. Gerolami, R. Uch, F. Jordier [et al.] // Canc. Gene Ther. – 2000. – Vol. 7. – No. 9. – P. 1286-1292.
    • Gogarten J. P. Prokaryotic evolution in light of gene transfer / J. P. Gogarten, W. F. Doolittle, J. G. Lawrence // Mol. Biol. Evol. – 2002. – Vol.19. – No. 12 – P. 2226-2238.
    • Gogarten J. P. Gene transfer: gene swapping craze dispatch reaches eukaryotes / J. P. Gogarten // Current Biology – 2003. – Vol. 13. – No. 2. – P. R53-R54.
    • Guven H. Efficient gene transfer into primary human natural killer cells by retroviral transduction / H. Guven, K.V. Konstantinidis, E. Alici [et al.] // Exper. Hematol. – 2005. – Vol. 33. No. 11. – P. 1320-1328.
    • Gladyshev E. A. Massive horizontal gene transfer in bdelloid rotifers / E. A. Gladyshev, M. Meselson, I. R. Arkhipova // Science. – 2008. – Vol. 320. – No. 5880. – P. 1210-1213.
    • Gilbert C. A role for host-parasite interactions in the horizontal transfer of transposons across phyla / C. Gilbert, S. Schaack, J.K. Pace [et al.] // Nature. – 2010. – Vol. 464. – No. 7293. – P. 1347-1350.
    • Houck M. A. Possible horizontal transfer of Drosophila genes by the mite Proctolaelaps regalis / M. A. Houck, J. B. Clark, K. R. Peterson [et al.] // Science. – 1991. – Vol. 253. – No. 5024. – P. 1125-1128.
    • Haupt S. Macromolecular trafficking between Nicotiana tabacum and the holoparasite Cuscuta reflexa / S. Haupt, K. J. Oparka, N. Sauer [et al.] // J. Exp. Bot. – 2001. – Vol. 52. – No. 354. – P. 173-177.
    • Hotopp J. C. D. Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes / J. C. D. Hotopp, M. E. Clark, D. C. Oliveira [et al.] // Science. – 2007. – Vol. 317. – No. 5845. – P. 1753-1756.
    • Hecht M. M. Inheritance of DNA transferred from American trypanosomes to human hosts / M. M. Hecht, N. Nitz, P. F. Araujo [et al.] // PLoS ONE. – 2010. – Vol. 5. – Iss. 2. – 15 p.
    • Hale M. C. Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens) / M. C. Hale, J. R. Jackson, J. A. DeWoody // Genetica. – 2010. – Vol. 138. – No. 7. – P. 745-756.
    • Ives A. Leishmania RNA virus controls the severity of mucocutaneous leishmaniasis / A. Ives, C. Ronet, F. Prevel [et al.] // Science. – 2011. – Vol. 331. – No. 6018. – P. 775-778.
    • iang S. C. Gene transfer by transduction in the marine environment / S. C. Jiang, J. H. Paul // Appl. Environ. Microbiol. – 1998. – Vol. 64. – No. 8. – P. 2780-2787.
    • Jerusalinsky D. Herpes simplex virus type 1-based amplicon vectors for fundamental research in neurosciences and gene therapy of neurological diseases / D. Jerusalinsky, M. V. Baez, A. L. Epstein // J. Physiol. – Paris. – 2012. – Vol. 106. – No. 1-2. – P. 2-11.
    • Karlin S. Comparative DNA analysis across diverse genomes / S. Karlin, A. M. Campbell, J. Mrázek // Ann. Rev. Genet. – 1998. – Vol. 32. – P. 185-225.
    • Kroer N. Effect of root exudates and bacterial metabolic activity on conjugal gene transfer in the rhizosphere of a marsh plant / N. Kroer, T. Barkay, S. Sørensen [et al.] // FEMS Microbiol. Ecol. – 1998. – Vol. 25. – No. 4. – P. 375-384.
    • Katinka M. D. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi / M. D. Katinka, S. Duprat, E. Cornillot [et al.] // Nature. – 2001. – Vol. 414. – No. 6862. – P. 450-453.
    • Kelli W. J. Perspectives on plasmid-based gene therapy: hallenges for the product and the process / W. J. Kelli // Biotechnol. Appl. Biochem. – 2003. – Vol. 37. – No. 3. – P. 219-223.
    • Kuraku S. Horizontal transfers of Tc1 elements between teleost fishes and their vertebrate parasites, lampreys / S. Kuraku, H. Qiu, A. Meyer // Genome Biol. Evol. – 2012. – Vol. 4. – No. 8. – P. 817-824.
    • Kim G. Genomic-scale exchange of mRNA between a parasitic plant and its hosts / G. Kim, M. L. LeBlanc, E. K. Wafula [et al.] // Science. – 2014. – Vol. 345, No. 6198. – P. 808-811.
    • Lawrence J. G. Amelioration of bacterial genomes: rates of change and exchange / J. G. Lawrence, H. Ochman // J. Mol. Evol. – 1997. – Vol. 44. – P. 383-397.
    • Lawrence J. G. Molecular archaeology of the Escherichia coli genome / J. G. Lawrence, H. Ochman // Proc. Nat. Acad. Sci. USA. – 1998. – Vol. 95. – No. 16. – P. 9413-9417.
    • Laha T. The bandit, a new DNA transposon from a hookworm-possible horizontal genetic transfer between host and parasite / Th. Laha, A. Loukas, S. Wattanasatitarpa [et al.] // PLoS Negl. Trop. Dis. – 2007. – Vol. 1. – No. 1. – 11 p.
    • Loreto E. L. S. Revisiting horizontal transfer of transposable elements in Drosophila / E.L.S. Loreto1, C.M.A. Carareto, P. Capy // Heredity. – 2008. – Vol. 100. – No. 6. – P. 545-554.
    • Liu H. Widespread horizontal gene transfer from double-stranded RNA viruses to eukaryotic nuclear genomes / H. Liu, Y. Fu, D. Jiang [et al.] // J. Virol. – 2010. – Vol. 84. – No. 22. – P. 11876-11887.
    • Mallet L. V. Whole genome evaluation of horizontal transfers in the pathogenic fungus Aspergillus fumigatus / L.V Mallet1, J. Becq, P. Deschavanne // BMC Genomics. – 2010. – No. 11,171. – 13 p.
    • Muto A. The guanine and cytosine content of genomic DNA and bacterial evolution / A. Muto, S. Osawa // Proc. Nat. Acad. Sci. USA. – 1987. – Vol. 84. – No. 1. – P. 166-169.
    • Mayorov V. I. B2 elements present in the human genome / V. I. Mayorov, I. B. Rogozin, E. A. Elisaphenko [et al.] // Mammal. Genome. – 2000. – Vol. 11. – No. 2. – P. 177-179.
    • Mower J. P. Gene transfer from parasitic to host plants / J. P. Mower, S. Stefanović, G. J. Young [et al.] // Nature. – 2004. – Vol. 432. – No. 7014. – P. 165-166.
    • Melamed P. Evidence for lateral gene transfer from salmonids to two Schistosome species / Ph. Melamed, K. L. Chong, M. V. Johansen // Nat. Genet. – 2005. – Vol. 36. – No. 8. – P. 786-787.
    • Morales M. E. piggyBac transposon mediated transgenesis of the human blood fluke, Schistosoma mansoni / M.E. Morales, V.H. Mann, K.J. Kines [et al.] // FASEB J. – 2007. – Vol. 21. – No. 13. – P. 3479-3489.
    • Moliner C. Evidence of horizontal gene transfer between amoeba and bacteria / C. Moliner, P.-E. Fournier, D. Raoult // Clinic. Microbiol. Infect. – 2009. – Vol. 15. – Suppl. 2. – P.178-180.
    • McNutty S. N. Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer / S. N. McNulty, J. M. Foster, M. Mitreva [et al.] // PLoS ONE. – 2010. – Vol. 5. – 9 p.
    • Moran N. A. Lateral transfer of genes from fungi underlies carotenoid production in aphids / N. A. Moran, T. Jarvik // Science. – 2010. – Vol. 328. – No. 5978. P. 624-627.
    • Mayer W. E. Horizontal gene transfer of microbial cellulases into nematode genomes is associated with functional assimilation and gene turnover / W. E Mayer, L. N. Schuster, G. Bartelmes [et al.] // BMC Evol. Biol. – 2011. – No. 11:13. -10 p.
    • McGinty S. E. Horizontal gene transfer and the evolution of bacterial cooperation / S. E. McGinty, D. J. Rankin, S. P. Brown // Evolution. – 2011. – Vol. 65. – No. 1. – P. 21-32.
    • Mehrabi R. Horizontal gene and chromosome transfer in plant pathogenic fungi affecting host range / R. Mehrabi, A. H. Bahkali, K. A. Abd-Elsalam [et al.] // FEMS Microbiol. Rev. – 2011. – Vol. 35. – No. 3. – P. 542-554.
    • Nelson K. E. Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima / K. E. Nelson, R. A. Clayton, S. R. Gill [et al.] // Nature. – 1999. – Vol. 399. – No. 6734. – P. 323-329.
    • Ochiai K. Studies on the inheritance of drug resistance between Shigella strains and Escherichia coli strains / K. Ochiai, T. Yamanaka, K. Kimura [et al.] // Nihon Iji Shimpo. – 1959. – No. 1861. – P. 34-46.
    • Pritham E. J. Transposable elements and factors influencing their success in eukaryotes / E. J. Pitham // J. Heredity. – 2009. – Vol. 100. – No. 5. – P. 648-655.
    • Pierce S. K. Transcriptomic evidence for the expression of horizontally transferred algal nuclear genes in the photosynthetic sea slug, Elysia chlorotica / S. K. Pierce, X. Fang, J. A. Schwartz [et al.] // Mol. Biol. Evol. – 2012. – Vol. 29. – No. 6. – P. 1545-1556.
    • Rumpho M. E. Horizontal gene transfer of the algal nuclear gene psbO to the photosynthetic sea slug Elysia chlorotica / M. E. Rumphoa, J. M. Worful, J. Lee [et al.] // Proc. Natl. Acad. Sci. U.S.A. – 2008. – Vol. 105. – No. P. 17867-17871.
    • Rolland Th. Insertion of horizontally transferred genes within conserved syntenic regions of yeast genomes / Th. Rolland, C. Neuveglise, Ch. Sacerdot [et al.] // PLoS ONE. – 2009. – Vol .4. – 14 p.
    • Rödelsperger C. Computational archaeology of the Pristionchus pacificus genome reveals evidence of horizontal gene transfers from insects / C. Rödelsperger, R. J. Sommer // BMC Evol. Biol. – 2011. – No. 11:239. – 11 p.
    • Richards T. A. Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes / T. A. Richards, D. M. Soanes, M. D. M. Jones [et al.] // Proc. Nat. Acad. Sci. USA. – 2011. – Vol. 108. – No. 37 – P. 15258-15263.
    • Sueoka N. On the genetic basis of variation and heterogeneity of DNA base composition / N. Sueoka // Proc. Nat. Acad. Sci. USA. – 1962. – Vol. 48. – No. 4. – P. 582-592.
    • Schubbert R. Foreign (M13) DNA ingested by mice reaches peripheral leukocytes, spleen, and liver via the intestinal wall mucosa and can be covalently linked to mouse DNA / R. Schubbert, D. Renz, B. Schmitz [et al.] // Proc. Nat. Acad. Sci. USA. – 1997. – Vol. 94. – No. 3. – P. 961-966.
    • Salzet M. Molecular crosstalk in host-parasite relationships: schistosome- and leech-host interactions / M. Salzet, A. Capron, G. B. Stefano // Parasitol. Today. – 2000. – Vol. 16. – No. 12. – P. 536-540.
    • Stroun M. Alu repeat sequences are present in increased proportions compared to a unique gene in plasma/serum DNA / M. Stroun, J. Lyautey, Ch. Lederrey [et al.] // Annals N.Y. Acad. Sci. – 2001. – Vol. 945. – P. 258-264.
    • Salzberg S. L. Microbial genes in the human genome: lateral transfer or gene loss? / S. L. Salzberg, O. White, J. Peterson [et al.] // Science. – 2001. – Vol. 292. – Vol. 5523. – P. 1903-1906.
    • Striepen B. Gene transfer in the evolution of parasite nucleotide biosynthesis / B. Striepen, A. J. P. Pruijssers, J. Huang [et al.] // Proc. Nat. Acad. Sci. USA. – 2004. – Vol. 101. – No. 9. – P. 3154-3159.
    • Sørensen S. J. Studiing plasmid horizontal transfer in situ; a critical review / S. J. Sørensen, M. Bailey, L.H. Hansen [et al.] // Nature Rev. Microbiol. – 2005. – Vol. 3. – No. 9. – P. 700-710.
    • Stegemann S. Exchange of genetic material between cells in plant tissue grafts / S. Stegemann, R. Bock // Science. – 2009. – Vol. 324. – P. 649-651.
    • Slot J. C. Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi / J. C. Slot, A. Rokas // Curr. Biol. – 2011. – Vol. 21. – No. 2. – P. 134-139.
    • Stegemann S. Horizontal transfer of chloroplast genomes between plant species / S. Stegemann, M. Keuthe, S. Greiner [et al.] // Proc. Nat. Acad. Sci. USA. – 2012. – Vol. 109. – No. 7. – P. 2434-2438.
    • Teixeira A. R. L. Possible integration of Trypanosoma cruzi kDNA minicircles into the host cell genome by infection / A. R. L. Teixeira, E. R. Argafiaraz, L. H. Freitas Jr. [et al.] // Mutat. Res. – 1994. – Vol. 305. – No. 2. – 197–209.
    • Thomas Ch. M. Mechanisms of, and barriers to, horizontal gene transfer between bacteria / Ch. M. Thomas, K. M. Nielsen // Nature Rev. Microbiol. – 2005. – Vol. 3. – No. 9. – P. 711-721.
    • Taberlet P. Environmental DNA / P. Taberlet, E. Coissac, M. Hajibabaei [et al.] // Mol. Ecol. – 2012. – Vol. 21. – No. 8. – P. 1789-1793.
    • Thyssen G. Cell-to-cell movement of plastids in plants / G. Thyssen, Z. Svab, P. Maliga // Proc. Nat. Acad. Sci. USA. – 2012. – Vol. 109. – No. 7. – P. 2439-2443.
    • Uh M. Transgene constructs in coho salmon (Oncorhynchus kisutch) are repeated in a head-to-tail fashion and can be integrated adjacent to horizontally-transmitted parasite DNA / M. Uh, J. Khattra, R.H. Devlin // Transgenic Res. – 2006. – Vol. 15. – No. 6. – P. 711-727.
    • Van Valen L. A new evolutionary law / L. Van Valen // Evol. Theory – 1976. – Vol. 1. – P. 1-30.
    • Vanderkwaak T. J. An advanced generation of adenoviral vectors selectively enhances gene transfer for ovarian cancer gene therapy approaches / T. J. Vanderkwaak, M. Wang, J. Gómez-Navarro [et al.] // Gynecol. Oncol. – 1999. – Vol. 74. – No. 2. – P. 227-234.
    • Van Gaal E. V. B. Plasmid engineering for controlled and sustained gene expression for nonviral gene therapy / E. V. B. van Gaal, W. E. Hennink, D. J. A. Crommelin [et al.] // Pharmac. Res. – 2006. – Vol. 23. – No. 6. – P. 1053-1074.
    • Wang A. L. Viruses of parasitic protozoa / A. L. Wang, C. C. Wang // Parasitol. Today. – 1991. – Vol. 7. – No. 4. – P. 76-80.
    • Wlodarczyk M. Conjugal transfer of plasmid and chromosomal markers between strains of Thiobacillus versutus / M. Wlodarczyk, E. Piechucka // Curr. Microbiol. – 1995. – Vol. 30. – No. 4. – P. 185-191.
    • Woolfit M. An ancient horizontal gene transfer between mosquito and the endosymbiotic bacterium Wolbachia pipientis / M. Woolfit, I. Iturbe-Ormaetxe, E. A. McGraw [et al.] // Mol. Biol. Evol. – 2009. – Vol. 26. – No. 2. – P. 367-374.
    • Wijayawardena B. K. Hosts, parasites, and horizontal gene transfer / B. K. Wijayawardena, D. J. Minchella, J. A. DeWoody // Trends Parasitol. – 2013. – Vol. 29. – No. 7. – P. 329-338.
    • Yoshida S. Horizontal gene transfer by the parasitic plant Striga hermonthica / S. Yoshida, Sh. Maruyama, H. Nozaki [et al.] // Science. – 2010. – Vol. 328. – No. 5982. – P. 1128-1128.
    • Zhu B. Horizontal gene transfer in silkworm, Bombyx mori / B. Zhu, M.-M. Lou, G.-L. Xie [et al.] // BMC Genomics. – 2011. – No. 12, Vol. 248. – 9 p.
    • Zhao L. Interspecific communication between pinewood nematode, its insect vector, and associated microbes / L. Zhao, M. Mota, P. Vieira Rebecca [et al.] // Trends Parasitol. – 2014. – Vol. 30. – No. 6. – P. 299-308.
    Публікація статті «Світ Медицини та Біології» №3(51) 1 частина 2015 рік , 143-150 сторінки, код УДК 613